REvolver: Modeling sequence evolution under domain constraints.
Koestler, T.; von Haeseler, A.; Ebersberger, I.;
Mol Biol Evol 2012; 29(9):2133-45
A Consistent Backbone for the Fungi.
Ebersberger, I.; de Matos Simoes, R.; Kupczok, A.; Gube, M.; Kothe, E.; Voigt, K.; von Haeseler, A.;
Mol Biol Evol 2012; 29:1319-1334.
Pancrustacean phylogeny in the light of new phylogenomic data: support for Remipedia as the possible sister group of Hexapoda.
von Reumont, BM.; Jenner, RA.; Wills, MA.; DellAmpio, E.; Pass, G.; Ebersberger, I.; Meyer, B.; Koenemann, S.; Iliffe, TM.; Stamatakis, A.; Niehuis, O.; Meusemann, K.; Misof, B.;
Mol Biol Evol 2012; 29:1031-1045
2011 | top |
Phylogenomic analyses of malaria parasites and evolution of their exported proteins.
Scharf, KD.; Berberich, T.; Ebersberger, I.; Nover, L.;
BMC Evolutionary Biology. 2011; 11:167
Zygomycetes, microsporidia, and the evolutionary ancestry of sex determination.
Koestler, T.; Ebersberger, I.;
Genome Biology and Evolution. 2011; 3:186-194
2010 | top |
FACT: Functional annotation transfer between proteins with similar feature architecture.
Koestler, T.; von Haeseler, A.; Ebersberger, I.;
BMC Bioinformatics. 2010; 11:417
A phylogenomic approach to resolve the arthropod tree of life.
Meusemann, K.; von Reumont, BM.; Simon, S.; Roeding, F.; Strauss, S.; Kück, P.; Ebersberger, I.; Walzl, M.; Pass, G.; Breuers, S.; Achter, V.; von Haeseler, A.; Burmester, T.; Hadrys, H.; Wägele, JW.; Misof, B.;
Mol Biol Evol. 2010; 27(11):2451-2464
2009 | top |
Support for the monophyletic origin of Gnathifera from phylogenomics.
Witek, A.; Herlyn, H.; Ebersberger, I.; Mark Welch, DB.; Hankeln, T.;
Mol Phylogenet Evol. 2009; 53(3):1037-1041
HaMStR: profile hidden markov model based search for orthologs in ESTs.
Ebersberger, I.; Strauss, S.; von Haeseler, A.;
BMC Evol Biol. 2009; 9:157
Genome-wide RNAi screen identifies genes involved in intestinal pathogenic bacterial infection.
Cronin, SJ.; Nehme, NT.; Limmer, S.; Liegeois, S.; Pospisilik, JA.; Schramek, D.; Leibbrandt, A.; Simoes Rde, M.; Gruber, S.; Puc, U.; Ebersberger, I.; Zoranovic, T.; Neely, GG.; von Haeseler, A.; Ferrandon, D.; Penninger, JM.;
Science. 2009; 325(5938):340-343
2008 | top |
Centrin4 coordinates cell and nuclear division in T. brucei.
Shi, J.; Franklin, JB.; Yelinek, JT.; Ebersberger, I.; Warren, G.; He, CY;.
J Cell Sci. 2008; 121(Pt 18):3062-3070
Rooted triple consensus and anomalous gene trees.
Ewing, GB.; Ebersberger, I.; Schmidt, HA.; von Haeseler, A.;
BMC Evol Biol. 2008; 8:118
TbG63, a golgin involved in Golgi architecture in Trypanosoma brucei.
Ramirez, IB.; de Graffenried, CL.; Ebersberger, I.; Yelinek, J.; He, CY.; Price, A.; Warren, G.;
J Cell Sci. 2008; 121(Pt 9):1538-1546
2007 | top |
Targeted deletion of AIF decreases mitochondrial oxidative phosphorylation and protects from obesity and diabetes.
Pospisilik, JA.; Knauf, C.; Joza, N.; Benit, P.; Orthofer, M.; Cani, PD.; Ebersberger, I.; Nakashima, T.; Sarao, R.; Neely, G.; Esterbauer, H.; Kozlov, A.; Kahn, CR.; Kroemer, G.; Rustin, P.; Burcelin, R.; Penninger, JM.;
Cell. 2007; 131(3):476-491
EST sequencing of Onychophora and phylogenomic analysis of Metazoa.
Roeding, F.; Hagner-Holler, S.; Ruhberg, H.; Ebersberger, I.; von Haeseler, A.; Kube, M.; Reinhardt, R.; Burmester, T.;
Mol Phylogenet Evol. 2007; 45(3):942-951
Mapping human genetic ancestry.
Ebersberger, I.; Galgoczy, P.; Taudien, S.; Taenzer, S.; Platzer, M.; von Haeseler, A.;
Mol Biol Evol. 2007; 24(10):2266-2276
2006 | top |
Multiplex amplification of the mammoth mitochondrial genome and the evolution of Elephantidae.
Krause, J.; Dear, PH.; Pollack, JL.; Slatkin, M.; Spriggs, H.; Barnes, I.; Lister, AM.; Ebersberger, I.; Pääbo, S.; Hofreiter, M.;
Nature. 2006; 439(7077):724-727
2005 | top |
Cracks in the shell–zooming in on eggshell formation in the human parasite Schistosoma mansoni.
Ebersberger, I.; Knobloch, J.; Kunz, W.;
Dev Genes Evol. 2005; 215(5):261-267
A genomic region evolving toward different GC contents in humans and chimpanzees indicates a recent and regionally limited shift in the mutation pattern.
Ebersberger, I.; Meyer, M.;
Mol Biol Evol. 2005; 22(5):1240-1245
2003 | top |
A neutral explanation for the correlation of diversity with recombination rates in humans.
Hellmann, I.; Ebersberger, I.; Ptak, SE.; Płłbo, S.; Przeworski, M.;
Am J Hum Genet. 2003 Jun;72(6):1527-1535
Selection on human genes as revealed by comparisons to chimpanzee cDNA.
Hellmann, I.; Zollner, S.; Enard, W.; Ebersberger, I.; Nickel, B.; Paabo, S.;
Genome Res. 2003; 13(5):831-837
2002 | top |
Genomewide comparison of DNA sequences between humans and chimpanzees.
Ebersberger, I.; Metzler, D.; Schwarz, C.; Pääbo, S.;
Am J Hum Genet. 2002; 70(6):1490-1497
1997 | top |
A variable intron distribution in globin genes of Chironomus: evidence for recent intron gain.
Hankeln, T.; Friedl, H.; Ebersberger, I.; Martin, J.; Schmidt, ER.;
Gene. 1997; 205(1-2):151-160